Information for motif7


Reverse Opposite:

p-value:1e-111
log p-value:-2.562e+02
Information Content per bp:1.454
Number of Target Sequences with motif84.0
Percentage of Target Sequences with motif5.39%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets27.1 +/- 11.6bp
Average Position of motif in Background26.2 +/- 6.3bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AGGGTCGCCT----
NNNGGGGCGCCCCCNN

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGGGTCGCCT---
NNGGCCACGCCTTTN

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGGGTCGCCT
-AGCGCGCC-

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AGGGTCGCCT-
CGCGCCGGGTCACGTA

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGGGTCGCCT----
ANCGCGCGCCCTTNN

PB0110.1_Bcl6b_2/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AGGGTCGCCT--
NNTNAGGGGCGGNNNN

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGGGTCGCCT----
NTCGCGCGCCTTNNN

PB0117.1_Eomes_2/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AGGGTCGCCT-
GCGGAGGTGTCGCCTC

PB0057.1_Rxra_1/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----AGGGTCGCCT--
NTNNNGGGGTCANGNNN

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----AGGGTCGCCT-
AGAGCGGGGTCAAGTA