Information for motif8


Reverse Opposite:

p-value:1e-99
log p-value:-2.300e+02
Information Content per bp:1.688
Number of Target Sequences with motif93.0
Percentage of Target Sequences with motif5.97%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets22.5 +/- 12.8bp
Average Position of motif in Background20.8 +/- 5.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0138.2_REST/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----VACCCCGGAC------
TTCAGCACCATGGACAGCGCC

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----VACCCCGGAC------
TCAGCACCATGGACAGCTCC

MA0131.1_HINFP/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:VACCCCGGAC----
----GCGGACGTTN

MA0146.2_Zfx/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--VACCCCGGAC--
GGGGCCGAGGCCTG

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:VACCCCGGAC--
--CCAGGAACAG

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--VACCCCGGAC----
TCGACCCCGCCCCTAT

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-VACCCCGGAC-
TCCCNNGGGACN

MA0028.1_ELK1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:VACCCCGGAC-
-GAGCCGGAAG

MA0154.2_EBF1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--VACCCCGGAC
GTCCCCAGGGA-

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:VACCCCGGAC---
---RCCGGAARYN