p-value: | 1e-36 |
log p-value: | -8.291e+01 |
Information Content per bp: | 1.557 |
Number of Target Sequences with motif | 26.0 |
Percentage of Target Sequences with motif | 4.77% |
Number of Background Sequences with motif | 1.1 |
Percentage of Background Sequences with motif | 0.09% |
Average Position of motif in Targets | 20.4 +/- 9.0bp |
Average Position of motif in Background | 31.2 +/- 1.5bp |
Strand Bias (log2 ratio + to - strand density) | -0.2 |
Multiplicity (# of sites on avg that occur together) | 1.06 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer
Match Rank: | 1 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CTCTGTCCAT-- --CTGTTCCTGG |
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NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer
Match Rank: | 2 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTCTGTCCAT- -ATTTTCCATT |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTCTGTCCAT -GCTGTG--- |
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MA0138.2_REST/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTCTGTCCAT--------- GGCGCTGTCCATGGTGCTGAA |
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Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTCTGTCCAT--- -NCTGTCAATCAN |
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PH0141.1_Pknox2/Jaspar
Match Rank: | 6 |
Score: | 0.57 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CTCTGTCCAT-- AAGCACCTGTCAATAT |
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REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer
Match Rank: | 7 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTCTGTCCAT-------- GGAGCTGTCCATGGTGCTGA |
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MA0065.2_PPARG::RXRA/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CTCTGTCCAT- TGACCTTTGCCCTAN |
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PH0169.1_Tgif1/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CTCTGTCCAT--- NNNCAGCTGTCAATATN |
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MA0504.1_NR2C2/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CTCTGTCCAT- TGACCTCTGACCCCN |
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