Information for motif12


Reverse Opposite:

p-value:1e-32
log p-value:-7.575e+01
Information Content per bp:1.462
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif5.32%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets26.0 +/- 12.1bp
Average Position of motif in Background22.7 +/- 7.4bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0107.1_RELA/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCGCGATTTC-
-GGGAATTTCC

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCGCGATTTC---
---TGGTTTCAGT

PB0127.1_Gata6_2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCGCGATTTC-----
NGCTGCGATATCGNCGC

MA0101.1_REL/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCGCGATTTC-
-GGGGATTTCC

MA0483.1_Gfi1b/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCGCGATTTC
TGCTGTGATTT-

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCGCGATTTC
GCAGTGATTT-

MA0105.3_NFKB1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCGCGATTTC--
-GGGAATTTCCC

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCGCGATTTC-
-GGGGATTTCC

MA0156.1_FEV/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CCGCGATTTC---
-----ATTTCCTG

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCGCGATTTC-
GCCGCCATCTTG