Information for motif15


Reverse Opposite:

p-value:1e-30
log p-value:-7.074e+01
Information Content per bp:1.548
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif4.22%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets27.4 +/- 11.5bp
Average Position of motif in Background22.8 +/- 5.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0522.1_Tcf3/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TTGCAACTGG-
NTGCAGCTGTG

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TTGCAACTGG----
NNTNCGCACCTGTNGAN

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TTGCAACTGG--
--GCAGCTGTNN

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTGCAACTGG----
NNNNAGCAGCTGCTGAN

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TTGCAACTGG--
--NCAGCTGCTG

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TTGCAACTGG--
--ACAGCTGTTN

MA0499.1_Myod1/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TTGCAACTGG----
-TGCAGCTGTCCCT

MA0461.1_Atoh1/Jaspar

Match Rank:8
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TTGCAACTGG-
---CAGATGGC

MA0500.1_Myog/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTGCAACTGG-
NNGCAGCTGTC

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTGCAACTGG
-ANCAGCTG-