Information for motif19


Reverse Opposite:

p-value:1e-27
log p-value:-6.285e+01
Information Content per bp:1.705
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif3.85%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets28.6 +/- 12.0bp
Average Position of motif in Background16.2 +/- 4.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GAATCCCACA
RCATTCCWGG

PB0114.1_Egr1_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAATCCCACA-----
NNAGTCCCACTCNNNN

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAATCCCACA---
-NWAACCACADNN

NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GAATCCCACA
GGGGGAATCCCC--

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAATCCCACA
GCATTCCAGN

MA0002.2_RUNX1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GAATCCCACA---
--AAACCACAGAN

PB0098.1_Zfp410_1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GAATCCCACA---
NNNTCCATCCCATAANN

MA0511.1_RUNX2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAATCCCACA------
-CAAACCACAAACCCC

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAATCCCACA
HTTTCCCASG

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GAATCCCACA--
--ATGCCAGACN