Information for motif2


Reverse Opposite:

p-value:1e-68
log p-value:-1.566e+02
Information Content per bp:1.698
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif9.17%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets20.1 +/- 8.3bp
Average Position of motif in Background14.2 +/- 0.8bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0163.1_PLAG1/Jaspar

Match Rank:1
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CGCMGCGGCCSSGGGCGGGG
----GGGGCCCAAGGGGG--

MA0516.1_SP2/Jaspar

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CGCMGCGGCCSSGGGCGGGG-
------GGGNGGGGGCGGGGC

MA0079.3_SP1/Jaspar

Match Rank:3
Score:0.58
Offset:10
Orientation:reverse strand
Alignment:CGCMGCGGCCSSGGGCGGGG-
----------GGGGGCGGGGC

PB0101.1_Zic1_1/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CGCMGCGGCCSSGGGCGGGG
-----CACCCCCGGGGGGG-

MA0162.2_EGR1/Jaspar

Match Rank:5
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CGCMGCGGCCSSGGGCGGGG-
-------GGCGGGGGCGGGGG

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.55
Offset:10
Orientation:reverse strand
Alignment:CGCMGCGGCCSSGGGCGGGG--
----------GGGGGCGGGGCC

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CGCMGCGGCCSSGGGCGGGG
----ATTGCCTGAGGCAAT-

MA0599.1_KLF5/Jaspar

Match Rank:8
Score:0.54
Offset:11
Orientation:reverse strand
Alignment:CGCMGCGGCCSSGGGCGGGG-
-----------GGGGNGGGGC

PB0103.1_Zic3_1/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CGCMGCGGCCSSGGGCGGGG
-----CCCCCCCGGGGGGGT

PB0102.1_Zic2_1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CGCMGCGGCCSSGGGCGGGG
----ACCCCCCCGGGGGGN-