Information for motif20


Reverse Opposite:

p-value:1e-25
log p-value:-5.897e+01
Information Content per bp:1.507
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif3.67%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets23.0 +/- 10.8bp
Average Position of motif in Background31.1 +/- 4.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0461.1_Atoh1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:SKCKGSTGGH
--CAGATGGC

MA0130.1_ZNF354C/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:SKCKGSTGGH-
-----GTGGAT

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:SKCKGSTGGH
NNCAGGTGNN

MA0104.3_Mycn/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:SKCKGSTGGH
--CACGTGGC

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:SKCKGSTGGH
--CACGTGNT

PB0147.1_Max_2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--SKCKGSTGGH--
NNGTCGCGTGNCAC

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:SKCKGSTGGH-
-GCAGCTGTNN

c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:SKCKGSTGGH
--CACGTGGN

MA0500.1_Myog/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:SKCKGSTGGH-
GACAGCTGCAG

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.56
Offset:-10
Orientation:forward strand
Alignment:----------SKCKGSTGGH
CNNBRGCGCCCCCTGSTGGC