Information for motif21


Reverse Opposite:

p-value:1e-25
log p-value:-5.854e+01
Information Content per bp:1.877
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif4.40%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets28.0 +/- 12.5bp
Average Position of motif in Background28.9 +/- 7.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--KGGTGAGGCC
NTGGGTGTGGCC

MA0493.1_Klf1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-KGGTGAGGCC
TGGGTGTGGCN

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-KGGTGAGGCC
DGGGYGKGGC-

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-KGGTGAGGCC
TGGGTGTGGC-

MA0039.2_Klf4/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-KGGTGAGGCC
TGGGTGGGGC-

MA0599.1_KLF5/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-KGGTGAGGCC
GGGGNGGGGC-

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.66
Offset:5
Orientation:forward strand
Alignment:KGGTGAGGCC---
-----AGGCCTNG

MA0146.2_Zfx/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:KGGTGAGGCC--------
----CAGGCCNNGGCCNN

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:KGGTGAGGCC-
---CTAGGCCT

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----KGGTGAGGCC--
NNAGGGGCGGGGTNNA