Information for motif22


Reverse Opposite:

p-value:1e-23
log p-value:-5.515e+01
Information Content per bp:1.450
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif3.49%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets22.5 +/- 13.3bp
Average Position of motif in Background13.0 +/- 6.7bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CCGGCGGGGC-
GGGGGCGGGGCC

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----CCGGCGGGGC---
NAGANTGGCGGGGNGNA

MA0079.3_SP1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCGGCGGGGC
GGGGGCGGGGC

MA0516.1_SP2/Jaspar

Match Rank:4
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CCGGCGGGGC
GGGNGGGGGCGGGGC

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CCGGCGGGGC
CCCCCCCGGGGGGGT

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCGGCGGGGC--
AGGGGGCGGGGCTG

PB0101.1_Zic1_1/Jaspar

Match Rank:7
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CCGGCGGGGC
CACCCCCGGGGGGG-

MA0599.1_KLF5/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CCGGCGGGGC
GGGGNGGGGC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCGGCGGGGC
-GGGGGGGG-

MA0039.2_Klf4/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCGGCGGGGC
TGGGTGGGGC