Information for motif24


Reverse Opposite:

p-value:1e-20
log p-value:-4.766e+01
Information Content per bp:1.557
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif3.12%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.1 +/- 8.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.47
Offset:5
Orientation:reverse strand
Alignment:RSCAGKGGAGMWCMMGSMAG
-----CGGAGC---------

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.47
Offset:5
Orientation:reverse strand
Alignment:RSCAGKGGAGMWCMMGSMAG
-----GGGAGGACNG-----

MA0056.1_MZF1_1-4/Jaspar

Match Rank:3
Score:0.45
Offset:3
Orientation:forward strand
Alignment:RSCAGKGGAGMWCMMGSMAG
---TGGGGA-----------

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.44
Offset:2
Orientation:reverse strand
Alignment:RSCAGKGGAGMWCMMGSMAG
--CSTGGGAAAD--------

PH0037.1_Hdx/Jaspar

Match Rank:5
Score:0.44
Offset:2
Orientation:forward strand
Alignment:RSCAGKGGAGMWCMMGSMAG
--AAGGCGAAATCATCGCA-

MA0473.1_ELF1/Jaspar

Match Rank:6
Score:0.44
Offset:9
Orientation:forward strand
Alignment:RSCAGKGGAGMWCMMGSMAG--
---------GAACCAGGAAGTG

MA0527.1_ZBTB33/Jaspar

Match Rank:7
Score:0.41
Offset:7
Orientation:reverse strand
Alignment:RSCAGKGGAGMWCMMGSMAG--
-------NAGNTCTCGCGAGAN

MA0105.3_NFKB1/Jaspar

Match Rank:8
Score:0.41
Offset:4
Orientation:reverse strand
Alignment:RSCAGKGGAGMWCMMGSMAG
----GGGAAATTCCC-----

MA0103.2_ZEB1/Jaspar

Match Rank:9
Score:0.41
Offset:2
Orientation:reverse strand
Alignment:RSCAGKGGAGMWCMMGSMAG
--CAGGTGAGG---------

MA0152.1_NFATC2/Jaspar

Match Rank:10
Score:0.41
Offset:5
Orientation:reverse strand
Alignment:RSCAGKGGAGMWCMMGSMAG
-----TGGAAAA--------