Information for motif26


Reverse Opposite:

p-value:1e-16
log p-value:-3.783e+01
Information Content per bp:1.576
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif3.67%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets22.9 +/- 13.9bp
Average Position of motif in Background19.8 +/- 2.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--MACCGCGATC-----
CGAACAGTGCTCACTAT

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:MACCGCGATC
CACAGN----

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:MACCGCGATC---
-GCCGCCATCTTG

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--MACCGCGATC---
NNNACCGAGAGTNNN

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer

Match Rank:5
Score:0.50
Offset:0
Orientation:forward strand
Alignment:MACCGCGATC--
GYCATCMATCAT

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:6
Score:0.50
Offset:1
Orientation:forward strand
Alignment:MACCGCGATC-
-NTATYGATCH

MA0117.1_Mafb/Jaspar

Match Rank:7
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:MACCGCGATC
--NCGTCAGC

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-MACCGCGATC-
TGACCTTGACCT

PB0127.1_Gata6_2/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--MACCGCGATC-----
NGCTGCGATATCGNCGC

MA0067.1_Pax2/Jaspar

Match Rank:10
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:MACCGCGATC
--NCGTGACN