Information for motif4


Reverse Opposite:

p-value:1e-62
log p-value:-1.444e+02
Information Content per bp:1.785
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif8.62%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets25.1 +/- 11.6bp
Average Position of motif in Background18.8 +/- 7.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------GGGCATGTCC
NNNNTTGGGCACNNCN

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------GGGCATGTCC
ATGCCCGGGCATGT--

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGGCATGTCC
AAGGCAAGTGT

MA0597.1_THAP1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GGGCATGTCC
TNNGGGCAG----

NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGGCATGTCC
GGGAATTTCC

MA0058.2_MAX/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GGGCATGTCC--
--CCATGTGCTT

MA0464.1_Bhlhe40/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGGCATGTCC-
NTGCACGTGAG

NRF1/Promoter/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGGCATGTCC
GTGCGCATGCGC

MA0106.2_TP53/Jaspar

Match Rank:9
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------GGGCATGTCC
CATGTCTGGGCATGT--

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGGCATGTCC
CCWGGAATGY--