Information for motif6


Reverse Opposite:

p-value:1e-54
log p-value:-1.259e+02
Information Content per bp:1.559
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif6.61%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets23.2 +/- 12.6bp
Average Position of motif in Background30.7 +/- 6.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGGCTTCGGA
--GCTCCG--

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGGCTTCGGA
--GCTTCC--

MA0028.1_ELK1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CGGCTTCGGA--
--GAGCCGGAAG

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CGGCTTCGGA----
----RCCGGAARYN

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CGGCTTCGGA----
----RCCGGAAGTD

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CGGCTTCGGA----
----DCCGGAARYN

PB0034.1_Irf4_1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CGGCTTCGGA---
TNTGGTTTCGATACN

MA0146.2_Zfx/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGGCTTCGGA---
CAGGCCNNGGCCNN

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CGGCTTCGGA
AGGCCTAG--

MA0048.1_NHLH1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CGGCTTCGGA
NCGCAGCTGCGN-