Information for motif7


Reverse Opposite:

p-value:1e-43
log p-value:-9.969e+01
Information Content per bp:1.703
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif5.50%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets21.5 +/- 10.9bp
Average Position of motif in Background29.7 +/- 2.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0524.1_TFAP2C/Jaspar

Match Rank:1
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CAGMGCCCGGCSGSYGCKCC
---TGCCCTGGGGCNANN--

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.47
Offset:-5
Orientation:forward strand
Alignment:-----CAGMGCCCGGCSGSYGCKCC
CNNBRGCGCCCCCTGSTGGC-----

MA0003.2_TFAP2A/Jaspar

Match Rank:3
Score:0.46
Offset:3
Orientation:reverse strand
Alignment:CAGMGCCCGGCSGSYGCKCC
---TGCCCTGAGGCANTN--

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.46
Offset:15
Orientation:forward strand
Alignment:CAGMGCCCGGCSGSYGCKCC-
---------------GCTCCG

PB0003.1_Ascl2_1/Jaspar

Match Rank:5
Score:0.46
Offset:5
Orientation:forward strand
Alignment:CAGMGCCCGGCSGSYGCKCC--
-----CTCAGCAGCTGCTACTG

MA0154.2_EBF1/Jaspar

Match Rank:6
Score:0.45
Offset:4
Orientation:reverse strand
Alignment:CAGMGCCCGGCSGSYGCKCC
----TCCCTGGGGAN-----

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.45
Offset:11
Orientation:forward strand
Alignment:CAGMGCCCGGCSGSYGCKCC-
-----------CNGTCCTCCC

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.44
Offset:2
Orientation:forward strand
Alignment:CAGMGCCCGGCSGSYGCKCC
--ATGCCCTGAGGC------

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.44
Offset:7
Orientation:forward strand
Alignment:CAGMGCCCGGCSGSYGCKCC
-------CTGCGCATGCGC-

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.44
Offset:2
Orientation:reverse strand
Alignment:CAGMGCCCGGCSGSYGCKCC
--WTGSCCTSAGGS------