Information for motif8


Reverse Opposite:

p-value:1e-41
log p-value:-9.544e+01
Information Content per bp:1.714
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif5.32%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets22.9 +/- 8.8bp
Average Position of motif in Background24.3 +/- 10.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GGCCGGCCTG-
---AGGCCTAG

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGCCGGCCTG-----
GGNGCGNCTGTTNNN

MA0146.2_Zfx/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GGCCGGCCTG
GGGGCCGAGGCCTG

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGCCGGCCTG-
---AGGCCTNG

Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GGCCGGCCTG-
GTCATGCHTGRCTGS

MA0524.1_TFAP2C/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGCCGGCCTG--------
---TGCCCTGGGGCNANN

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GGCCGGCCTG--
------GCTGTG

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GGCCGGCCTG
----TGCGTG

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GGCCGGCCTG--
NGTAGGTTGGCATNNN

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GGCCGGCCTG--
----GGCGCGCT