Information for motif1


Reverse Opposite:

p-value:1e-718
log p-value:-1.655e+03
Information Content per bp:1.566
Number of Target Sequences with motif377.0
Percentage of Target Sequences with motif15.50%
Number of Background Sequences with motif0.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets25.0 +/- 8.5bp
Average Position of motif in Background24.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:1
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-GKRCATGYCBGGACATGYCB
NGGGCATGTCTGGGCATGTT-

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:2
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-GKRCATGYCBGGACATGYCB
NGGGCATGTCTGGGCATGTT-

MA0525.1_TP63/Jaspar

Match Rank:3
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:GKRCATGYCBGGACATGYCB
NGGCATGTCTGGGCATGTNN

p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer

Match Rank:4
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-GKRCATGYCBGGACATGYCB
NNNGCATGTCNNGACATGCN-

MA0106.2_TP53/Jaspar

Match Rank:5
Score:0.88
Offset:3
Orientation:reverse strand
Alignment:GKRCATGYCBGGACATGYCB
---CATGTCTGGGCATGT--

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.76
Offset:4
Orientation:reverse strand
Alignment:GKRCATGYCBGGACATGYCB
----ATGCCCGGGCATGT--

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GKRCATGYCBGGACATGYCB
NAAACCGGTTNNAACCGGTT-

MA0145.2_Tcfcp2l1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GKRCATGYCBGGACATGYCB
---CCAGTTCAAACCAG---

TRa(NR)/C17.2-TRa-ChIP-Seq(GSE38347)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GKRCATGYCBGGACATGYCB
GGTCANYTGAGGWCA-----

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.50
Offset:10
Orientation:reverse strand
Alignment:GKRCATGYCBGGACATGYCB-
----------NNACTTGCCTT