Information for motif11


Reverse Opposite:

p-value:1e-78
log p-value:-1.815e+02
Information Content per bp:1.771
Number of Target Sequences with motif83.0
Percentage of Target Sequences with motif3.41%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets24.9 +/- 12.7bp
Average Position of motif in Background30.2 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0140.1_Pknox1/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGGTCCC-
GGATTGACAGGTCNTT

PH0141.1_Pknox2/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGGTCCC-
NNATTGACAGGTGCTT

PH0104.1_Meis2/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGGTCCC-
NTATTGACAGGTNNTN

GFY(?)/Promoter/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GACAGGTCCC
ACTACAATTCCC

PH0102.1_Meis1/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGGTCCC-
NTATTGACAGCTNNTT

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GACAGGTCCC----
ATCCACAGGTGCGAAAA

PH0105.1_Meis3/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGGTCCC-
GTATTGACAGGTNNTT

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GACAGGTCCC
NNCAGGTGNN

PB0047.1_Myf6_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GACAGGTCCC--
GAAGAACAGGTGTCCG

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GACAGGTCCC
CACAGN----