Information for motif12


Reverse Opposite:

p-value:1e-64
log p-value:-1.478e+02
Information Content per bp:1.530
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif2.96%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets26.5 +/- 13.2bp
Average Position of motif in Background20.4 +/- 4.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCGAAGCGAC
-NGAAGC---

MA0062.2_GABPA/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCGAAGCGAC
CCGGAAGTGGC

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCGAAGCGAC---
TACCATAGCAACGGT

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CCGAAGCGAC-------
TGTGACCCTTAGCAACCGATTAA

MA0076.2_ELK4/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCGAAGCGAC
NCCGGAAGTGG-

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCGAAGCGAC
-CGGAGC---

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCGAAGCGAC---
CCGCATAGCAACGGA

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCGAAGCGAC--
CGGAAGTGAAAC

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCGAAGCGAC-
---AACCGANA

PB0035.1_Irf5_1/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CCGAAGCGAC
ATAAACCGAAACCAA