Information for motif16


Reverse Opposite:

p-value:1e-43
log p-value:-9.938e+01
Information Content per bp:1.762
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif2.26%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets24.9 +/- 12.2bp
Average Position of motif in Background27.7 +/- 10.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CTGGCTGCTG
--ANCAGCTG

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTGGCTGCTG----
--AGCAGCTGCTNN

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CTGGCTGCTG---
---NCAGCTGCTG

MA0500.1_Myog/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CTGGCTGCTG---
--GACAGCTGCAG

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CTGGCTGCTG---
---GCAGCTGTNN

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTGGCTGCTG-----
NNNNAGCAGCTGCTGAN

MA0499.1_Myod1/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CTGGCTGCTG-----
--TGCAGCTGTCCCT

MA0522.1_Tcf3/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTGGCTGCTG--
-NTGCAGCTGTG

MA0521.1_Tcf12/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTGGCTGCTG--
-NNGCAGCTGTT

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:10
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CTGGCTGCTG---
---HCAGCTGDTN