Information for motif17


Reverse Opposite:

p-value:1e-39
log p-value:-9.134e+01
Information Content per bp:1.821
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif2.14%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets29.0 +/- 11.3bp
Average Position of motif in Background40.6 +/- 3.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GGGGCCCCGG--
TTGGGGGCGCCCCTAG

PB0057.1_Rxra_1/Jaspar

Match Rank:2
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGCCCCGG--
NTNNNGGGGTCANGNNN

MA0163.1_PLAG1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGGGCCCCGG----
GGGGCCCAAGGGGG

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGGGCCCCGG--
--GGTCCCGCCC

MA0056.1_MZF1_1-4/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGGGCCCCGG
---TCCCCA-

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGGGCCCCGG---
-NGTCCCNNGGGA

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGGGCCCCGG----
--GTCCCCAGGGGA

PB0025.1_Glis2_1/Jaspar

Match Rank:8
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------GGGGCCCCGG
NTNTGGGGGGTCNNNA

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GGGGCCCCGG---
---TTCCNGGAAG

PB0156.1_Plagl1_2/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GGGGCCCCGG--
GCTGGGGGGTACCCCTT