Information for motif19


Reverse Opposite:

p-value:1e-28
log p-value:-6.543e+01
Information Content per bp:1.677
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets25.8 +/- 9.9bp
Average Position of motif in Background34.4 +/- 1.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0516.1_SP2/Jaspar

Match Rank:1
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TRTCCCKGMCMCTTTCCTCY
--GCCCCGCCCCCTCCC---

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TRTCCCKGMCMCTTTCCTCY
-GGCCCCGCCCCC-------

MA0528.1_ZNF263/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TRTCCCKGMCMCTTTCCTCY
TCCTCCTCCCCCTCCTCCTCC

MA0090.1_TEAD1/Jaspar

Match Rank:4
Score:0.52
Offset:9
Orientation:forward strand
Alignment:TRTCCCKGMCMCTTTCCTCY-
---------CACATTCCTCCG

PB0039.1_Klf7_1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TRTCCCKGMCMCTTTCCTCY
TCGACCCCGCCCCTAT-----

MA0081.1_SPIB/Jaspar

Match Rank:6
Score:0.52
Offset:13
Orientation:reverse strand
Alignment:TRTCCCKGMCMCTTTCCTCY
-------------TTCCTCT

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:TRTCCCKGMCMCTTTCCTCY
---------CCCCCCCC---

MA0079.3_SP1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TRTCCCKGMCMCTTTCCTCY
--GCCCCGCCCCC-------

MA0598.1_EHF/Jaspar

Match Rank:9
Score:0.51
Offset:11
Orientation:forward strand
Alignment:TRTCCCKGMCMCTTTCCTCY
-----------CCTTCCTG-

MA0474.1_Erg/Jaspar

Match Rank:10
Score:0.50
Offset:9
Orientation:reverse strand
Alignment:TRTCCCKGMCMCTTTCCTCY
---------CCACTTCCTGT