Information for motif20


Reverse Opposite:

p-value:1e-22
log p-value:-5.170e+01
Information Content per bp:1.746
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets22.1 +/- 13.0bp
Average Position of motif in Background34.6 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0131.1_HINFP/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GACGTTAGCG
GCGGACGTTN---

MA0018.2_CREB1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GACGTTAGCG
TGACGTCA---

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GACGTTAGCG
TGACGT-----

CRE(bZIP)/Promoter/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GACGTTAGCG
GTGACGTCACCG

PB0004.1_Atf1_1/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GACGTTAGCG-
ACGATGACGTCATCGA

MA0592.1_ESRRA/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GACGTTAGCG
NGTGACCTTGG--

PB0038.1_Jundm2_1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GACGTTAGCG-
NCGATGACGTCATCGN

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GACGTTAGCG-
CAGGTAAGTAT

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GACGTTAGCG---
ATTTACAGTAGCAAAA

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GACGTTAGCG
GATGACGTCA---