Information for motif21


Reverse Opposite:

p-value:1e-18
log p-value:-4.280e+01
Information Content per bp:1.540
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets25.0 +/- 9.0bp
Average Position of motif in Background19.5 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0149.1_EWSR1-FLI1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:MCCTKCCYCTGTTKCTBACC
-CCTTCCTTCCTTCCTTCC-

MA0598.1_EHF/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:MCCTKCCYCTGTTKCTBACC
-CCTTCCTG-----------

MA0080.3_Spi1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-MCCTKCCYCTGTTKCTBACC
NCACTTCCTCTTTTN------

MA0138.2_REST/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--MCCTKCCYCTGTTKCTBACC
GGCGCTGTCCATGGTGCTGAA-

MA0079.3_SP1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-MCCTKCCYCTGTTKCTBACC
GCCCCGCCCCC----------

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:MCCTKCCYCTGTTKCTBACC
CACTTCCTCT----------

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--MCCTKCCYCTGTTKCTBACC
GGAGCTGTCCATGGTGCTGA--

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---MCCTKCCYCTGTTKCTBACC
NAGCCCCGCCCCCN---------

MA0528.1_ZNF263/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---MCCTKCCYCTGTTKCTBACC
TCCTCCTCCCCCTCCTCCTCC--

MA0516.1_SP2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-MCCTKCCYCTGTTKCTBACC
GCCCCGCCCCCTCCC------