Information for motif3


Reverse Opposite:

p-value:1e-203
log p-value:-4.674e+02
Information Content per bp:1.658
Number of Target Sequences with motif139.0
Percentage of Target Sequences with motif5.71%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets23.6 +/- 10.6bp
Average Position of motif in Background24.8 +/- 5.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TGCACAGGCA-
ACATGCCCGGGCAT

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TGCACAGGCA--
NNTTTGCACACGGCCC

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TGCACAGGCA
--CACAGN--

MA0506.1_NRF1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGCACAGGCA-
TGCGCAGGCGC

PB0026.1_Gm397_1/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------TGCACAGGCA-
CAGATGTGCACATACGT

MA0106.2_TP53/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGCACAGGCA--
ACATGCCCAGACATG

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TGCACAGGCA-----
----AAGGCAAGTGT

PB0104.1_Zscan4_1/Jaspar

Match Rank:8
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------TGCACAGGCA
NTNTATGTGCACATNNN

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGCACAGGCA--
--AACAGGAAGT

MA0150.2_Nfe2l2/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGCACAGGCA-----
TGCTGAGTCATNNTG