Information for motif6


Reverse Opposite:

p-value:1e-121
log p-value:-2.799e+02
Information Content per bp:1.563
Number of Target Sequences with motif94.0
Percentage of Target Sequences with motif3.86%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets27.3 +/- 12.5bp
Average Position of motif in Background27.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.72
Offset:5
Orientation:forward strand
Alignment:CGACGGCTTC-
-----GCTTCC

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CGACGGCTTC-
-----GCTCCG

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CGACGGCTTC
----NGCTN-

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CGACGGCTTC-----
CTCAGCAGCTGCTACTG

MA0522.1_Tcf3/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CGACGGCTTC--
-CACAGCTGCAG

MA0500.1_Myog/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CGACGGCTTC--
-GACAGCTGCAG

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CGACGGCTTC-
NNAGCAGCTGCT

MA0117.1_Mafb/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CGACGGCTTC
NCGTCAGC---

MA0521.1_Tcf12/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGACGGCTTC--
-AACAGCTGCAG

MA0146.2_Zfx/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CGACGGCTTC
GGGGCCGAGGCCTG