Information for motif1


Reverse Opposite:

p-value:1e-178
log p-value:-4.106e+02
Information Content per bp:1.600
Number of Target Sequences with motif121.0
Percentage of Target Sequences with motif40.74%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif1.25%
Average Position of motif in Targets24.4 +/- 10.9bp
Average Position of motif in Background26.0 +/- 10.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.66
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0086.1_Irx5/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-TTVNAACATG------
ANTNNTACATGTANNTN

PH0085.1_Irx4/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TTVNAACATG------
NNTTTTACATGTANNNT

PH0083.1_Irx3_1/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TTVNAACATG------
ANTATTACATGTANNNN

PH0082.1_Irx2/Jaspar

Match Rank:4
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TTVNAACATG-------
TAAATACATGTAAAATT

PH0084.1_Irx3_2/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TTVNAACATG------
NNTATTACATGTANNNT

PH0087.1_Irx6/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TTVNAACATG------
ANTTNTACATGTANTTN

MA0058.2_MAX/Jaspar

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TTVNAACATG-
-AAGCACATGG

MA0147.2_Myc/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTVNAACATG-
-AAGCACATGG

MA0106.2_TP53/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TTVNAACATG
ACATGCCCAGACATG

MA0526.1_USF2/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTVNAACATG--
-GGTCACATGAC