Information for motif11


Reverse Opposite:

p-value:1e-15
log p-value:-3.613e+01
Information Content per bp:1.443
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif7.41%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.0 +/- 8.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0101.1_Zic1_1/Jaspar

Match Rank:1
Score:0.52
Offset:5
Orientation:forward strand
Alignment:SCSGGSSSSSSCSSSGGSGC
-----CACCCCCGGGGGGG-

PB0103.1_Zic3_1/Jaspar

Match Rank:2
Score:0.51
Offset:5
Orientation:forward strand
Alignment:SCSGGSSSSSSCSSSGGSGC
-----CCCCCCCGGGGGGGT

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.51
Offset:6
Orientation:forward strand
Alignment:SCSGGSSSSSSCSSSGGSGC-
------CCCCCCCGGGGGGGT

MA0163.1_PLAG1/Jaspar

Match Rank:4
Score:0.47
Offset:5
Orientation:forward strand
Alignment:SCSGGSSSSSSCSSSGGSGC
-----GGGGCCCAAGGGGG-

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:5
Score:0.46
Offset:6
Orientation:reverse strand
Alignment:SCSGGSSSSSSCSSSGGSGC-
------NTCCCCTCAGGGANT

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:6
Score:0.45
Offset:6
Orientation:reverse strand
Alignment:SCSGGSSSSSSCSSSGGSGC-
------NTCGCCTCAGGCAAT

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.44
Offset:9
Orientation:reverse strand
Alignment:SCSGGSSSSSSCSSSGGSGC-
---------GGGGGCGGGGCC

PB0204.1_Zfp740_2/Jaspar

Match Rank:8
Score:0.44
Offset:7
Orientation:reverse strand
Alignment:SCSGGSSSSSSCSSSGGSGC----
-------ANTNCCGGGGGGAANTT

PB0052.1_Plagl1_1/Jaspar

Match Rank:9
Score:0.44
Offset:-1
Orientation:forward strand
Alignment:-SCSGGSSSSSSCSSSGGSGC
TTGGGGGCGCCCCTAG-----

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.44
Offset:11
Orientation:forward strand
Alignment:SCSGGSSSSSSCSSSGGSGC
-----------GGGGGGGG-