Information for motif12


Reverse Opposite:

p-value:1e-13
log p-value:-3.121e+01
Information Content per bp:1.653
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif6.73%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif1.20%
Average Position of motif in Targets22.3 +/- 11.8bp
Average Position of motif in Background23.2 +/- 2.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:1
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--RGCCTGAGGC---
ATTGCCTGAGGCAAT

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:2
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--RGCCTGAGGC---
ATTGCCTCAGGCAAT

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--RGCCTGAGGC
WTGSCCTSAGGS

MA0524.1_TFAP2C/Jaspar

Match Rank:4
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-RGCCTGAGGC----
TGCCCTGGGGCNANN

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--RGCCTGAGGC
ATGCCCTGAGGC

MA0003.2_TFAP2A/Jaspar

Match Rank:6
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-RGCCTGAGGC----
TGCCCTGAGGCANTN

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:7
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--RGCCTGAGGC---
ATTGCCTGAGGCGAA

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:8
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--RGCCTGAGGC---
ATTCCCTGAGGGGAA

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--RGCCTGAGGC--
NTGCCCANNGGTNA

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--RGCCTGAGGC--
NTGCCCTAGGGCAA