Information for motif5


Reverse Opposite:

p-value:1e-32
log p-value:-7.526e+01
Information Content per bp:1.561
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif12.12%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.89%
Average Position of motif in Targets26.5 +/- 12.7bp
Average Position of motif in Background24.2 +/- 7.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0079.3_SP1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CTCCGCCTTC
GCCCCGCCCCC

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CTCCGCCTTC-
NAGCCCCGCCCCCN

MA0516.1_SP2/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CTCCGCCTTC----
GCCCCGCCCCCTCCC

MA0162.2_EGR1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTCCGCCTTC---
CCCCCGCCCCCGCC

MA0057.1_MZF1_5-13/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTCCGCCTTC
TTCCCCCTAC

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTCCGCCTTC
GGCCCCGCCCCC

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CTCCGCCTTC-
-----GCTTCC

MA0528.1_ZNF263/Jaspar

Match Rank:8
Score:0.60
Offset:-11
Orientation:reverse strand
Alignment:-----------CTCCGCCTTC
TCCTCCTCCCCCTCCTCCTCC

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CTCCGCCTTC---
TACGCCCCGCCACTCTG

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CTCCGCCTTC--
GGTCCCGCCCCCTTCTC