Information for motif1


Reverse Opposite:

p-value:1e-800
log p-value:-1.843e+03
Information Content per bp:1.502
Number of Target Sequences with motif496.0
Percentage of Target Sequences with motif42.91%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets24.6 +/- 8.8bp
Average Position of motif in Background14.6 +/- 9.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:1
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--CATGTCHDRACATGTHCVND
AACATGCCCAGACATGCCCN--

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:2
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--CATGTCHDRACATGTHCVND
AACATGCCCAGACATGCCCN--

p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer

Match Rank:3
Score:0.92
Offset:-4
Orientation:forward strand
Alignment:----CATGTCHDRACATGTHCVND
NNNGCATGTCNNGACATGCN----

MA0106.2_TP53/Jaspar

Match Rank:4
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:CATGTCHDRACATGTHCVND
CATGTCTGGGCATGT-----

MA0525.1_TP63/Jaspar

Match Rank:5
Score:0.88
Offset:-3
Orientation:forward strand
Alignment:---CATGTCHDRACATGTHCVND
AGACATGCCCAGACATGCCC---

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CATGTCHDRACATGTHCVND
-ATGCCCGGGCATGT-----

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CATGTCHDRACATGTHCVND
AACCGGTTNNAACCGGTTTN--

PH0086.1_Irx5/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CATGTCHDRACATGTHCVND-
----AATATACATGTAAAATT

MA0145.2_Tcfcp2l1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CATGTCHDRACATGTHCVND
CTGGNTNNAACTGG------

PH0082.1_Irx2/Jaspar

Match Rank:10
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CATGTCHDRACATGTHCVND-
----TAAATACATGTAAAATT