Information for motif11


Reverse Opposite:

p-value:1e-27
log p-value:-6.320e+01
Information Content per bp:1.451
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif3.20%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets26.9 +/- 11.8bp
Average Position of motif in Background22.2 +/- 7.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0049.1_Nr2f2_1/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----AGACCTTYSA--
NNNNTGACCTTTNNNN

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----AGACCTTYSA--
NNNGTGACCTTTGNNN

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-AGACCTTYSA
NTGACCTTGA-

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGACCTTYSA--
TGACCTTTNCNT

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----AGACCTTYSA--
NNNNATGACCTTGANTN

MA0141.2_Esrrb/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AGACCTTYSA--
TGACCTTGANNN

MA0160.1_NR4A2/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AGACCTTYSA
GTGACCTT---

MA0592.1_ESRRA/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AGACCTTYSA
NGTGACCTTGG-

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AGACCTTYSA
CTGACCTTTG-

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGACCTTYSA
TGACCTTGAN