Information for motif14


Reverse Opposite:

p-value:1e-21
log p-value:-5.030e+01
Information Content per bp:1.864
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.16%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets31.6 +/- 10.7bp
Average Position of motif in Background26.9 +/- 6.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CTCTGGGCTC
TCACCTCTGGGCAG

MA0484.1_HNF4G/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGGGCTC-
TGGACTTTGNNCTCN

MA0003.2_TFAP2A/Jaspar

Match Rank:3
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CTCTGGGCTC
CATTGCCTCAGGGCA-

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTCTGGGCTC
TCCCCTGGGGAC

MA0114.2_HNF4A/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CTCTGGGCTC
CTGGACTTTGGACTC

HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGGGCTC--
TGGACTTTGNNCTNTG

PB0133.1_Hic1_2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTCTGGGCTC----
NNNNTTGGGCACNNCN

PB0104.1_Zscan4_1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTCTGGGCTC-----
NTNTATGTGCACATNNN

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTCTGGGCTC
VBSYGTCTGG----

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTCTGGGCTC
GCCTCAGGGCAT