Information for motif15


Reverse Opposite:

p-value:1e-20
log p-value:-4.818e+01
Information Content per bp:1.645
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif2.68%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets27.8 +/- 10.6bp
Average Position of motif in Background18.1 +/- 4.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GGMAGGTYGC-
NAGANTGGCGGGGNGNA

MA0516.1_SP2/Jaspar

Match Rank:2
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------GGMAGGTYGC
GGGNGGGGGCGGGGC--

MA0598.1_EHF/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGMAGGTYGC
CAGGAAGG----

MA0079.3_SP1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGMAGGTYGC
GGGGGCGGGGC--

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GGMAGGTYGC
AGGGGGCGGGGCTG

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGMAGGTYGC
GGGGGCGGGGCC-

PB0039.1_Klf7_1/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GGMAGGTYGC-
NNAGGGGCGGGGTNNA

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGMAGGTYGC
NGAAGC----

MA0599.1_KLF5/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGMAGGTYGC
GGGGNGGGGC--

MA0597.1_THAP1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GGMAGGTYGC
TNNGGGCAG-----