Information for motif16


Reverse Opposite:

p-value:1e-18
log p-value:-4.183e+01
Information Content per bp:1.547
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets26.2 +/- 8.7bp
Average Position of motif in Background28.4 +/- 2.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CTGAAAAAGCCTGAAAAACA
NNCCTGNAAAAAAAAAAAAA---

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CTGAAAAAGCCTGAAAAACA
NNCCTGNAAAAAAAAAAAAA---

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CTGAAAAAGCCTGAAAAACA
NTNATGCAAYMNNHTGMAAY---

PB0186.1_Tcf3_2/Jaspar

Match Rank:4
Score:0.50
Offset:7
Orientation:forward strand
Alignment:CTGAAAAAGCCTGAAAAACA--
-------AGCCGAAAAAAAAAT

PH0064.1_Hoxb9/Jaspar

Match Rank:5
Score:0.48
Offset:5
Orientation:forward strand
Alignment:CTGAAAAAGCCTGAAAAACA-
-----AGAGCCATAAAATTCG

MA0152.1_NFATC2/Jaspar

Match Rank:6
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:CTGAAAAAGCCTGAAAAACA
-TGGAAAA------------

MA0140.2_TAL1::GATA1/Jaspar

Match Rank:7
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:CTGAAAAAGCCTGAAAAACA
CTGNNNNNNNCAGATAAG--

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:8
Score:0.46
Offset:7
Orientation:forward strand
Alignment:CTGAAAAAGCCTGAAAAACA-
-------TACTGGAAAAAAAA

MA0465.1_CDX2/Jaspar

Match Rank:9
Score:0.46
Offset:6
Orientation:forward strand
Alignment:CTGAAAAAGCCTGAAAAACA
------AAGCCATAAAA---

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.44
Offset:6
Orientation:forward strand
Alignment:CTGAAAAAGCCTGAAAAACA
------AGGCCTNG------