Information for motif17


Reverse Opposite:

p-value:1e-15
log p-value:-3.655e+01
Information Content per bp:1.804
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif2.25%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets19.4 +/- 11.8bp
Average Position of motif in Background16.1 +/- 7.1bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0161.1_NFIC/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:STGGCTKTTT
TTGGCA----

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:STGGCTKTTT
--NGCTN---

MA0442.1_SOX10/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:STGGCTKTTT
----CTTTGT

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:STGGCTKTTT-----
---KCTATTTTTRGH

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---STGGCTKTTT
TGATTGGCTANN-

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---STGGCTKTTT--
GGNGCGNCTGTTNNN

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---STGGCTKTTT
GGTCTGGCAT---

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:STGGCTKTTT
TWGTCTGV--

MA0042.1_FOXI1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:STGGCTKTTT----
--GGATGTTTGTTT

MA0100.2_Myb/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:STGGCTKTTT-
-TGGCAGTTGN