Information for motif19


Reverse Opposite:

p-value:1e-13
log p-value:-3.116e+01
Information Content per bp:1.707
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets21.8 +/- 13.3bp
Average Position of motif in Background35.7 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0051.1_IRF2/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGGTAAGCGA---------
-GGAAAGCGAAACCAAAAC

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGGTAAGCGA
CAGGTAAGTAT

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGGTAAGCGA
AAGGCAAGTGT

PB0094.1_Zfp128_1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGGTAAGCGA----
TTNGGGTACGCCNNANN

MA0597.1_THAP1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GGGTAAGCGA
TNNGGGCAG----

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGGTAAGCGA------
-GGAAANTGAAACTNA

MA0508.1_PRDM1/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GGGTAAGCGA
AGAAAGTGAAAGTGA

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGGTAAGCGA----
--GAAASYGAAASY

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGGTAAGCGA----
--GAAAGTGAAAGT

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGGTAAGCGA---
-CGGAAGTGAAAC