Information for motif20


Reverse Opposite:

p-value:1e-13
log p-value:-3.111e+01
Information Content per bp:1.799
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets25.9 +/- 13.6bp
Average Position of motif in Background27.6 +/- 1.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0597.1_THAP1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TTCTKCCCTG-
--CTGCCCGCA

MA0144.2_STAT3/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTCTKCCCTG---
--TTTCCCAGAAN

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TTCTKCCCTG-----
---TCCCCTGGGGAC

MA0056.1_MZF1_1-4/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TTCTKCCCTG
---TCCCCA-

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTCTKCCCTG-
-HTTTCCCASG

MA0152.1_NFATC2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTCTKCCCTG
-TTTTCCA--

MA0524.1_TFAP2C/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TTCTKCCCTG--------
---TGCCCTGGGGCNANN

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTCTKCCCTG--
-ATTTCCAAGAA

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTCTKCCCTG
-GCTTCC---

RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTCTKCCCTG
TGACCTTTGCCCTA