Information for motif21


Reverse Opposite:

p-value:1e-13
log p-value:-3.011e+01
Information Content per bp:1.387
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif3.03%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets25.4 +/- 12.5bp
Average Position of motif in Background25.8 +/- 6.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-HCACCTGTAV
NNCACCTGNN-

MA0103.2_ZEB1/Jaspar

Match Rank:2
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--HCACCTGTAV
CCTCACCTG---

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:3
Score:0.82
Offset:-5
Orientation:reverse strand
Alignment:-----HCACCTGTAV--
NNTNCGCACCTGTNGAN

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--HCACCTGTAV
NAACAGCTGT--

PB0047.1_Myf6_1/Jaspar

Match Rank:5
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---HCACCTGTAV---
CNGACACCTGTTCNNN

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--HCACCTGTAV
NNACAGCTGC--

MA0522.1_Tcf3/Jaspar

Match Rank:7
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-HCACCTGTAV
CACAGCTGCAG

MA0499.1_Myod1/Jaspar

Match Rank:8
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-HCACCTGTAV--
TGCAGCTGTCCCT

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:9
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--HCACCTGTAV
BAACAGCTGT--

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--HCACCTGTAV
TGACACCT----