Information for motif23


Reverse Opposite:

p-value:1e-9
log p-value:-2.194e+01
Information Content per bp:1.530
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets26.1 +/- 14.2bp
Average Position of motif in Background22.9 +/- 4.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0148.1_Mtf1_2/Jaspar

Match Rank:1
Score:0.84
Offset:0
Orientation:forward strand
Alignment:AAATAAGAAA----
AAATAAGAAAAAAC

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--AAATAAGAAA---
AAAAATAACAAACGG

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AAATAAGAAA--
AACAAACAACAAGAG

MA0035.3_Gata1/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--AAATAAGAAA
ANAGATAAGAA-

PB0021.1_Gata3_1/Jaspar

Match Rank:5
Score:0.71
Offset:-7
Orientation:forward strand
Alignment:-------AAATAAGAAA-----
TTTTTAGAGATAAGAAATAAAG

MA0037.2_GATA3/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AAATAAGAAA
AGATAAGA--

MA0036.2_GATA2/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AAATAAGAAA--
NCAGATAAGAANNN

PB0106.1_Arid5a_2/Jaspar

Match Rank:8
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AAATAAGAAA---
CATACAATACGAAATAA

MA0482.1_Gata4/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AAATAAGAAA
NNGAGATAAGA--

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AAATAAGAAA
NAGATAAGNN-