Information for motif3


Reverse Opposite:

p-value:1e-58
log p-value:-1.336e+02
Information Content per bp:1.670
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif6.06%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets26.4 +/- 13.1bp
Average Position of motif in Background38.6 +/- 6.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.85
Offset:-5
Orientation:forward strand
Alignment:-----TGTGCAAACA--
NNNVCTGWGYAAACASN

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----TGTGCAAACA---
TACATGTGCACATAAAA

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----TGTGCAAACA---
CAGATGTGCACATACGT

MA0157.1_FOXO3/Jaspar

Match Rank:4
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TGTGCAAACA
--TGTAAACA

MA0148.3_FOXA1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGTGCAAACA----
CAAAGTAAACANNNN

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------TGTGCAAACA
GGGCCGTGTGCAAAAA

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:7
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGTGCAAACA--
TATGTAAACANG

Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGTGCAAACA----
ATTTGCATACAATGG

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGTGCAAACA
AAAGTAAACA

MA0047.2_Foxa2/Jaspar

Match Rank:10
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGTGCAAACA
NCTAAGTAAACA