Information for motif4


Reverse Opposite:

p-value:1e-40
log p-value:-9.410e+01
Information Content per bp:1.698
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif3.37%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets27.4 +/- 13.2bp
Average Position of motif in Background23.5 +/- 5.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0473.1_ELF1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GAAGCAGGAA---
GAACCAGGAAGTG

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:2
Score:0.74
Offset:2
Orientation:forward strand
Alignment:GAAGCAGGAA--
--AVCAGGAAGT

MA0474.1_Erg/Jaspar

Match Rank:3
Score:0.74
Offset:3
Orientation:forward strand
Alignment:GAAGCAGGAA----
---ACAGGAAGTGG

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.74
Offset:3
Orientation:forward strand
Alignment:GAAGCAGGAA---
---ACAGGAAGTG

MA0098.2_Ets1/Jaspar

Match Rank:5
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GAAGCAGGAA-----
NNNACAGGAAGTGGN

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.74
Offset:2
Orientation:forward strand
Alignment:GAAGCAGGAA--
--NACAGGAAAT

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GAAGCAGGAA--
--NACAGGAAAT

MA0475.1_FLI1/Jaspar

Match Rank:8
Score:0.72
Offset:3
Orientation:forward strand
Alignment:GAAGCAGGAA----
---ACAGGAAGTGG

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GAAGCAGGAA--
--ANCAGGATGT

MA0598.1_EHF/Jaspar

Match Rank:10
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:GAAGCAGGAA--
----CAGGAAGG