Information for motif6


Reverse Opposite:

p-value:1e-36
log p-value:-8.475e+01
Information Content per bp:1.449
Number of Target Sequences with motif103.0
Percentage of Target Sequences with motif8.91%
Number of Background Sequences with motif15.4
Percentage of Background Sequences with motif1.93%
Average Position of motif in Targets25.4 +/- 12.6bp
Average Position of motif in Background31.1 +/- 5.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0476.1_FOS/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TGATTCATGT
TGTGACTCATT-

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TGATTCATGT
TGATTGATGA

MA0491.1_JUND/Jaspar

Match Rank:3
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--TGATTCATGT
GGTGACTCATC-

MA0462.1_BATF::JUN/Jaspar

Match Rank:4
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TGATTCATGT-
TGAGTCATTTC

MA0594.1_Hoxa9/Jaspar

Match Rank:5
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGATTCATGT-
TGATTTATGGC

MA0099.2_JUN::FOS/Jaspar

Match Rank:6
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGATTCATGT
TGAGTCA---

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:7
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TGATTCATGT
DATGASTCAT--

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TGATTCATGT
ATGACTCATC-

MA0477.1_FOSL1/Jaspar

Match Rank:9
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TGATTCATGT
GGTGACTCATG-

PB0178.1_Sox8_2/Jaspar

Match Rank:10
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TGATTCATGT----
ACATTCATGACACG