Information for motif7


Reverse Opposite:

p-value:1e-34
log p-value:-7.921e+01
Information Content per bp:1.726
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif3.72%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets25.1 +/- 14.1bp
Average Position of motif in Background34.2 +/- 9.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:1
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:ACACGCASGC
-CACGCA---

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer

Match Rank:2
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--ACACGCASGC
TBGCACGCAA--

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ACACGCASGC-
AGCAACAGCCGCACC

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACACGCASGC
GCACGTNC--

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ACACGCASGC--
AGCGGCACACACGCAA

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ACACGCASGC--
TCGTACCCGCATCATT

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACACGCASGC-
-CRCCCACGCA

HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACACGCASGC
GCACGTACCC

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ACACGCASGC
GGCCACACCCAN--

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACACGCASGC
GCCACACCCA---