Information for motif8


Reverse Opposite:

p-value:1e-29
log p-value:-6.843e+01
Information Content per bp:1.732
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif3.37%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets28.9 +/- 12.8bp
Average Position of motif in Background37.2 +/- 3.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.62
Offset:6
Orientation:forward strand
Alignment:RCAGTTCAGC-
------CAGCC

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-RCAGTTCAGC
RSCACTYRAG-

MA0117.1_Mafb/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:RCAGTTCAGC
--NCGTCAGC

MA0090.1_TEAD1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-RCAGTTCAGC-
CACATTCCTCCG

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:RCAGTTCAGC
GCATTCCAGN

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----RCAGTTCAGC---
AATCGCACTGCATTCCG

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:RCAGTTCAGC
RCATTCCWGG

POL002.1_INR/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:RCAGTTCAGC
TCAGTCTT--

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:RCAGTTCAGC------
-HWWGTCAGCAWWTTT

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--RCAGTTCAGC
AASCACTCAA--