Index of /btracks/erik/HOME_STORAGE

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]consensusBlacklist.bed2011-05-04 17:06 18K 
[ ]examples.desktop2015-07-13 16:41 8.8K 
[TXT]crumble.py2016-01-13 17:23 2.3K 
[TXT]density.py2016-01-14 01:24 4.0K 
[ ]query_CTL_crumble.bed2016-01-16 15:54 25K 
[ ]query_OIS_crumble.bed2016-01-16 15:55 30K 
[ ]CTL_density_cKrox_100000.bed2016-01-19 17:29 1.7K 
[ ]OIS_density_cKrox_100000.bed2016-01-19 17:49 1.7K 
[ ]OIS_density_cKrox_50000.bed2016-01-19 17:54 1.6K 
[ ]CTL_density_cKrox_50000.bed2016-01-19 17:55 1.4K 
[TXT]new_file.py2016-10-16 23:30 2.5K 
[ ]avg_expression_and_ATAC_fold_change_1.5_and_greater_no_dup.bed2016-10-21 12:40 462K 
[ ]ATAC_seq_max_TES_location_in_gene_without_TSS_up_regulated_no_dup.bed2016-10-23 16:53 39K 
[ ]Sequence_of_ATAC_seq_max_TES_location_in_gene_without_TSS_up_regulated_no_dup.bed2016-10-23 17:01 494K 
[TXT]max_region_two_standard_dev_above_mean_positive_z_score_diff_ATAC_seq_not_upregulated_25kb_to_TES_without_TSS_z_score_no_Y_no_dup.txt2016-10-24 18:39 11K 
[TXT]max_region_two_standard_dev_above_mean_positive_z_score_diff_ATAC_seq_upregulated_25kb_to_TES_without_TSS_z_score_no_Y_no_dup.txt2016-10-24 18:39 765  
[TXT]max_region_two_standard_dev_below_mean_positive_z_score_diff_ATAC_seq_not_upregulated_25kb_to_TES_without_TSS_z_score_no_Y_no_dup.txt2016-10-24 18:39 0  
[TXT]max_region_two_standard_dev_below_mean_positive_z_score_diff_ATAC_seq_upregulated_25kb_to_TES_without_TSS_z_score_no_Y_no_dup.txt2016-10-24 18:39 0  
[ ]fold_change_avg_all_genes_down_regulated_ATAC_auc.bed2016-11-10 18:00 339K 
[ ]fold_change_avg_all_genes_up_regulated_ATAC_auc.bed2016-11-10 18:00 621K 
[ ]Values_PD24_PD80_ATAC_seq_auc_enhancers_of_sig_expression_genes_with_h3k4me1.bed2016-11-10 23:31 119K 
[ ]ATAC_seq_and_expression_fold_change_at_enhancers_of_sig_exp_genes_with_H3K4me1.bed2016-11-10 23:45 68K 
[ ]ATAC_seq_TES_PD33_PD75_z_score_without_TSS_nY_ndup_not_sig_up_reg_pos_pro_sen_fd_ch_diff.bed2017-01-17 00:34 2.0M 
[ ]ATAC_seq_TES_PD33_PD75_z_score_without_TSS_nY_ndup_sig_up_reg_pos_pro_sen_fd_ch_diff.bed2017-01-17 00:34 152K 
[ ]AUC_PD75_100bp_window_PD75-Payel-8ul-novel-ATAC-seq-peaks-in-last_half_of_genes_no_dup.bed2017-02-01 01:41 121K 
[TXT]test2.txt2017-02-05 17:03 123K 
[TXT]test1.txt2017-02-05 17:28 13K 
[ ]AUC_diff_PD24_PD80_Parisha_all_novel_ATAC_peaks_from_Payel.bed2017-02-07 19:45 506K 
[ ]R_heatmap_maker_zscore.R2017-02-21 22:23 541  
[TXT]all_files_together.txt2017-02-21 22:42 33M 
[ ]Ensembl.Genes.hg19.bed2017-02-22 09:18 44M 
[TXT]cryptic_genes_all_fields.txt2017-02-22 09:43 47K 
[TXT]all_values.txt2017-02-24 00:31 50M 
[ ]all_max_values.bed2017-02-24 09:42 1.4M 
[TXT]output.txt2017-03-02 01:16 498K 
[ ]python-fit-1.0.0.tar.gz2017-03-18 13:57 6.4K 
[ ]output_chrY_test.out2017-03-18 14:40 873K 
[ ]output_chr10_test_small.out2017-03-21 01:21 709K 
[ ]output_chr19_test_small.out2017-03-21 01:40 169K 
[ ]all_most_likely_initiation_points_fixed_window_400.bed2017-03-21 02:20 2.5M 
[ ]all_most_likely_initiation_points_splice_redudant_removed_fixed_window_400.bed2017-03-21 02:20 1.5M 
[ ]output_chr13_test_small.out2017-03-22 08:57 565K 
[ ]AUC_fold_change_up_Expression_all_genes_1kb_promoters_PD33_PD75_Payel_ATAC.bed2017-03-24 21:32 660K 
[ ]genes_overlap_with_novel_ATAC_seq_peaks_expression_AUC_difference.bed2017-03-25 13:19 44K 
[ ]not_found_exons.bed2017-03-27 01:58 11K 
[ ]RefSeq.Genes.hg19.bed2017-03-27 01:58 9.0M 
[ ]all_most_likely_initiation_points_filtered_no_redudant_splice_isoforms_cryptic_part_methylation_RNA_seq_fold_change_with_exons_non_overlapping_non_close_to_promoters.bed2017-03-28 20:19 2.5M 
[ ]RNA_seq_pro_sen.all2017-03-28 22:34 2.4M 
[ ]cryptic_initiation_sites_filtered_final.bed2017-04-07 18:58 113K 
[ ]genes_of_562_with_cryptic_initiation_sites.bed2017-04-07 18:58 26K 
[ ]cryptic_genes_562_list_overlap_with_CAPH2.bed2017-04-07 18:58 1.6K 
[ ]cryptic_regions_562_list_overlap_with_CAPH2.bed2017-04-07 19:13 3.7K 
[ ]weiwei_cryptic_Refseq_with_CAPH2_binding_sites.bed2017-04-07 19:20 2.1K 
[TXT]weiwei_cryptic_genes_ensenbl.txt2017-04-07 19:24 7.8K 
[ ]cryptic_genes_sequence.bed2017-04-20 23:31 116K 
[ ]cryptic_genes_protein_sequences.bed2017-04-20 23:43 242K 
[DIR]Motifs_3/2017-05-03 01:20 -  
[ ]all_values_with_BATF.bed2017-05-03 19:41 169M 
[DIR]Motifs_BATF_peaks_pro/2017-05-18 14:18 -  
[DIR]Motifs_BATF_peaks_sen/2017-05-18 14:18 -  
[ ]all_values_with_BATF_with_nuc_atac_248_with_CBP_p300_H3K36me3.bed2017-05-18 17:18 245M 
[ ]for_Neil.tar.gz2017-05-18 18:35 1.1M 
[ ]all_values_with_BATF_with_CBP_p300_H3K36me3.bed2017-05-18 21:29 215M 
[ ]output_all_values_ATAC_H3K36me3.bed2017-05-19 14:08 28M 
[ ]RefSeq.Genes.mm10.bed2017-05-26 00:49 5.2M 
[ ]mm10.chrom.sizes2017-05-26 01:00 1.4K 
[ ]profile_of_H3K36me3_in_all_genes.bed2017-06-01 12:03 69M 
[IMG]Heatmap_of_profile_of_H3K36me3_in_all_genes.png2017-06-01 13:09 264K 
[ ]final_cryptic_file.bed2017-06-04 12:56 1.7M 
[ ]all_values_at_canonical_promoters.bed2017-06-15 23:15 98M 
[ ]tss_regions_of_genes_with_expression_and_low_fold_change_12_overlap_pro_sen_procap_peaks.bed2017-06-29 14:51 115K 
[ ]sequence_of_canonical_promoters.bed2017-06-29 14:56 2.7M 
[TXT]complement_overlap_of_homologs_genes_with_novel_procap_old_mouse_human_novel_procap.txt2017-10-01 18:48 12K 
[TXT]overlap_of_homologs_genes_with_novel_procap_old_mouse_human_novel_procap.txt2017-10-01 18:48 8.6K 
[ ]all_values_at_procap_peaks_in_genes_larger_4_rpm.bed2017-12-14 02:06 332M 
[ ]all_values_at_procap_peaks_in_genes_larger_4_rpm_5kb.bed2017-12-14 03:57 370M 
[DIR]Motifs_novel_procap_peaks_in_sen_in_last_half_of_genes_l_t_4/2017-12-21 02:51 -  
[ ]refseq_genes_IMR90_hg19_overlap_with_possible_cryptic_procap_locations_l_4.bed2017-12-22 01:21 223K 
[TXT]test.txt2017-12-22 01:37 1.9M 
[ ]sen_only_pro_cap_peaks_tss_last_half_of_gene_and_3500bp_from_nearest_promoter_l_t_4.bed2017-12-22 02:01 351K 
[ ]pro_sen_procap.all2018-01-19 03:53 8.8M 
[ ]RefSeq.Genes.merged.hg19.bed2018-01-20 20:15 527K 
[ ]RefSeq.Genes.merged_with_novel_procap_peak.hg19.bed2018-01-20 20:15 79K 
[ ]RefSeq.Genes.merged.mm10.bed2018-01-20 20:27 501K 
[ ]RefSeq.Genes.merged_with_novel_procap_peak.mm10.bed2018-01-20 20:27 24K 
[ ]all_values_at_procap_peaks_in_genes_larger_4_rpm_with_RNA_seq.bed2018-01-21 15:53 380M 
[ ]genes_merged_with_novel_procap_peak_H3K36me3_H3K79me_DNA_methyl.bed2018-01-30 02:45 43M 
[ ]all_genes_merged_with_novel_procap_peak_H3K36me3_H3K79me_DNA_methyl.bed2018-01-30 04:05 254M 
[DIR]Overexpression_ProCap/2018-02-09 03:29 -  
[TXT]ProCap-BATF-overlap-CD27_70-overexpression-peaks-larger-4-rpm-auc-fc-larger-than-4-last_half.not_Promoter.hg19.txt2018-02-20 03:25 8.1K 
[TXT]ProCap-TGFb-10-overlap-TGFb-0-overexpression-peaks-larger-4-rpm-auc-fc-larger-than-4-last_half.not_Promoter.hg19.txt2018-02-20 03:25 26K 
Apache/2.4.7 (Ubuntu) Server at 165.123.69.116 Port 80