Information for motif10


Reverse Opposite:

p-value:1e-38
log p-value:-8.925e+01
Information Content per bp:1.694
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets131.3 +/- 84.8bp
Average Position of motif in Background267.7 +/- 7.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AAGAATTCTCAG
NNCNNAACAATTNT---

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAGAATTCTCAG----
-AGTATTCTCGGTTGC

PB0175.1_Sox4_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAGAATTCTCAG---
GGAAAAATTGTTAGGAA

MA0483.1_Gfi1b/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AAGAATTCTCAG--
---AAATCACAGCA

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAGAATTCTCAG----
-NNAATTCTCGNTNAN

MF0010.1_Homeobox_class/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAGAATTCTCAG
AATAATT-----

PB0067.1_Sox18_1/Jaspar

Match Rank:7
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------AAGAATTCTCAG
NNTNANAACAATTNNA--

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AAGAATTCTCAG---
---NTTTCTNAGAAA

MA0087.1_Sox5/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AAGAATTCTCAG
NAACAAT------

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AAGAATTCTCAG-
---AAATCACTGC