Information for motif11


Reverse Opposite:

p-value:1e-36
log p-value:-8.481e+01
Information Content per bp:1.691
Number of Target Sequences with motif199.0
Percentage of Target Sequences with motif4.56%
Number of Background Sequences with motif56.2
Percentage of Background Sequences with motif1.60%
Average Position of motif in Targets155.0 +/- 84.7bp
Average Position of motif in Background138.8 +/- 78.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0144.2_STAT3/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TTCCCGGCTG
TTTCCCAGAAN

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTCCCGGCTG
TTCCCGCCWG

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTCCCGGCTG--
CCCCCTGCTGTG

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTCCCGGCTG
TTCCNGGAAG

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTCCCGGCTG-----
TCNCCTGCTGNGNNN

MA0518.1_Stat4/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTCCCGGCTG
NNNTTTCCTGGAAA

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTCCCGGCTG-----
TNTCCTGCTGTGNNG

MA0522.1_Tcf3/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TTCCCGGCTG---
--CACAGCTGCAG

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TTCCCGGCTG---
---HCAGCTGDTN

MA0471.1_E2F6/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTCCCGGCTG
NCTTCCCGCCC-