Information for motif14


Reverse Opposite:

p-value:1e-31
log p-value:-7.341e+01
Information Content per bp:1.677
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets146.4 +/- 72.8bp
Average Position of motif in Background239.8 +/- 12.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GACTAATCTG
-GCTAATCC-

PB0185.1_Tcf1_2/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GACTAATCTG-----
-NNTAATCCNGNCNN

PH0025.1_Dmbx1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GACTAATCTG-----
NNNATTAATCCGNTTNA

MA0467.1_Crx/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GACTAATCTG---
--CTAATCCTCTT

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GACTAATCTG
NCCTTATCTG

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GACTAATCTG-
-YCTTATCWVN

PH0138.1_Pitx2/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GACTAATCTG----
GNNNATTAATCCCTNCN

MA0132.1_Pdx1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GACTAATCTG
--CTAATT--

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GACTAATCTG
NNCTTATCTN

PH0035.1_Gsc/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GACTAATCTG----
AATCGTTAATCCCTTTA