Information for motif15


Reverse Opposite:

p-value:1e-30
log p-value:-7.125e+01
Information Content per bp:1.696
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets159.3 +/- 68.0bp
Average Position of motif in Background245.9 +/- 14.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GAGGAAATATGA
NACAGGAAAT----

MA0136.1_ELF5/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GAGGAAATATGA
AAGGAAGTA---

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:3
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GAGGAAATATGA---
---GWAAYHTGABMC

MA0156.1_FEV/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GAGGAAATATGA
CAGGAAAT----

MA0081.1_SPIB/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAGGAAATATGA
AGAGGAA------

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAGGAAATATGA
AVCAGGAAGT----

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAGGAAATATGA
NACAGGAAAT----

PB0012.1_Elf3_1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GAGGAAATATGA
AACAAGGAAGTAA--

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAGGAAATATGA
AGAGGAAGTG---

PB0058.1_Sfpi1_1/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GAGGAAATATGA
TTAAGAGGAAGTTA--